Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVLWS-ENL----------------KMDSLEILKDPKIKRIAMANPK-LAPYGKASMEVLDRLKLTP-S-L---KSKIIYGASISQAHQFIATKNAQIGFGALSLIDKK--DKNLSYF-II-----DKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 1TWY Chain:A ((28-275)) | ---------------------SEITISGSTSVARIMDVLAEKYNQQHPETYVAVQGVGSTAGISLLKKG-VADIAMTSRYLTESEAQ-NTL---HTFTLAFDGLAIVVNQANPVTNLTREQLYGIYKGQITNWKQVGGNDQ-KIAVVTREASSGTRYSFESLMGLTKTVKDREVSDVAPTALVVNSNSMMKTLVNHNTQAVGFISIGSVDKSVKAIQFEKADPTSDNIAKHTYQLSRPFLILHYSDN-ADEQTKEFIAFLKSESAKKLIVEYGYIMP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111832 for 1609 contacts (-69.5/contact) +
2D Compatibility (PS) -22770 + (NN) -4258 + (LL) 2816
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -143944.0 ( -89.46 by residue)
QMean score : 0.538
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