Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTR-NLEGIYYTPNRIVEQLFTLPKDF--DTTQAIFCDPAVGSGNFVMHALKLGFK----VENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQKDFLSLKHAPQFDCIFTNPPWGKKYNQNQKENFKQQFNLHQSLDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMAL-KFQMRSLIDFD-KPFKNLMTKAVGLALKKTHNKDQKISCFYQNSEFKRSPSSFFNNPKKIFNIHCSHQKNKILDHLFSLPHITLKNNAHFALGIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFKTHKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
| 2F8L Chain:A ((83-308)) | ----------------------------------------------------------------------------------------SNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR--QKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFEL-CREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKS-QARKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77026 for 1770 contacts (-43.5/contact) +
2D Compatibility (PS) -23251 + (NN) -10909 + (LL) 20864
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -99772.0 ( -56.37 by residue)
QMean score : 0.371
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