Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHVGIENYTLLDTACGNKEFLKLHHP------KKIGADIDPKCDALIINALANPKRENYGIS-QDEPLIIVGNPPYNDRTSFIKQDI-----KNKDFIFEIDNDLKSRDLGISFL-KSFAILKPAF-ICVLHPLSYLIKEANFKQLK-LFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
2IH2 Chain:A ((21-213)) | ------------------VETPPEVVDFMVSLAEAP---RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAE-GILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE-DFALLREFLAREGKT-SVYYLG-EVFPQKKV-SAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70076 for 1372 contacts (-51.1/contact) +
2D Compatibility (PS) -18597 + (NN) -6108 + (LL) 2072
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -104309.0 ( -76.03 by residue)
QMean score : 0.315
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