Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYD-------GMSFNAFKEYKKRVFAKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQQNKLSYSSNSQKELYVEIENNQASIIMEK |
3FKA Chain:A ((6-115)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHIAALTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIAMCEDAADA--ETDPFWAISSVSVQGD-----IAMLHVENDWAGM-----RFDD----FLTVLLHEGSWRIVSKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41896 for 711 contacts (-58.9/contact) +
2D Compatibility (PS) -11370 + (NN) -4408 + (LL) 13772
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -47402.0 ( -66.67 by residue)
QMean score : 0.458
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