Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTLVKNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLDEIFSTTSPSANNKIGQEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIKKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK
2QDQ Chain:A ((2496-2529))
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGIAQIIAAQEEMLRKERELEEARKKLAQIRQQQ-----
General information:
TITO was launched using:
RESULT:
Template:
2QDQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4025 for 127 contacts (31.7/contact) +
2D Compatibility (PS) -3904 + (NN) -4163 + (LL) 16368
1D Compatibility (HY) 0 + (ID) 450
Total energy: 11876.0 ( 93.51 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2QDQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QDQ-query.scw
PDB file :
Tito_Scwrl_2QDQ.pdb
: