Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MGIIYLILFLIVIYLLYRILDVLEQK
2HHH Chain:U ((2-25))
GKGDRRTRRGKIWRGT-----YGKYR-----PRK
General information:
TITO was launched using:
RESULT:
Template:
2HHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8756 for 65 contacts (-134.7/contact) +
2D Compatibility (PS) -1378 + (NN) 1682 + (LL) 1580
1D Compatibility (HY) 1200 + (ID) 300
Total energy: -5972.0 ( -91.88 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2HHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HHH-query.scw
PDB file :
Tito_Scwrl_2HHH.pdb
: