Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILK--DKRVFSVCGAHGKSSITAMLSAICPA----FGAIIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQKRVIYKEDPFLKNYSKDAIVLE-KKDIYNIQYILK------DGEPYTSFE-LKNLGAFLVWGLGEHNATNASLAILSALD-ELNLEEIRNNLLNFKGIKKRFDILQK---NNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVKRDIDLKAHFKHYNPTFIDRVRKKG---DFLELLVNDNV---VET-IEKGFVIGFGAGDITYQLRGEM |
| 1J6U Chain:A ((0-438)) | -------------HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRDDNPEIVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHGNYEKGNGPVVYELDESEEFFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTDLVVTFAEDELTSHLG---DVTFGVK---KGTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEV----FENEKIVVIFQPHR--------GNFAKALQ-LADEVVVTEVYD---------S-------GKMIWDSLKSLGKEAYFVE--KLPELEKVI-SVSENTVFLFVGAGDIIYSSRRFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31402 for 3182 contacts (9.9/contact) +
2D Compatibility (PS) -38832 + (NN) 12631 + (LL) 4396
1D Compatibility (HY) 26800 + (ID) 1350
Total energy: 35047.0 ( 11.01 by residue)
QMean score : -0.040
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