Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMA-----WGGLSSLEGASHFVIYLARKG-VTYDSDYVKKVMHEV---KKRDY----DTHSRFAQIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTA-EFGVSVMASFGYRNQEI----TPKTRWKTEVIYEVIE
1ICR Chain:A ((2-216))
----DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNER-KMLDASHVVVFCAKTAMDDV---WLKLVVDQEDADGRFATPEAKAANDKGRKFFADM-----HRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGL----K-EKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV-
General information:
TITO was launched using:
RESULT:
Template:
1ICR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63022 for 1425 contacts (-44.2/contact) +
2D Compatibility (PS) -21269 + (NN) -7757 + (LL) 816
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -103382.0 ( -72.55 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1ICR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICR-query.scw
PDB file :
Tito_Scwrl_1ICR.pdb
: