Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFKNKKWLFLAPLAGYT-----DLP-------FRSVVKKFGVDVTTSEMVSSHSLVYA---------F--DKTSKMLEK--SPLEDHFMAQISGS-----------------------KE------------SVVKEAVEKINALDHVSGIDFNCG---------CPAPKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITSVKVRLGFE------KKIPKEIAHALNDAPVDYVVVHGRTRSD--RYQKDKIDYESIALMKKILKKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV |
| 3GR7 Chain:A ((12-325)) | RGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAV-GQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRA-KEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGP-LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKISAPVQYERGWRF------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92414 for 1918 contacts (-48.2/contact) +
2D Compatibility (PS) -24726 + (NN) -10580 + (LL) 6664
1D Compatibility (HY) -800 + (ID) 1900
Total energy: -123756.0 ( -64.52 by residue)
QMean score : 0.380
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