Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRI--KYFIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTH--NGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNK-QEFLDFKQKYLD--FS-RTK-APKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLANYLF--------DDFKTTLENLAQ-SLPKTPKIQVKNSYLLQIQKNK |
| 1E4E Chain:A ((4-342)) | IKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENEN-CY---SAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDRP---VAATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVSG-CEVGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLALK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142324 for 2683 contacts (-53.0/contact) +
2D Compatibility (PS) -35132 + (NN) -14477 + (LL) 2232
1D Compatibility (HY) -21200 + (ID) 4200
Total energy: -215101.0 ( -80.17 by residue)
QMean score : 0.415
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