Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTVIFVAVLQAALGMLSVRQEI---------CRNPSQPHDFKSLV---------IVTNFY
3DF0 Chain:C ((2-86))
-----ALDDLIDTLGECVVLDPMDSTYLEALGIKEGTIPPEYRKLLEKNEHAIDALSSDFT
General information:
TITO was launched using:
RESULT:
Template:
3DF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1341 for 99 contacts (-13.5/contact) +
2D Compatibility (PS) -3968 + (NN) -1592 + (LL) 788
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -9263.0 ( -93.57 by residue)
QMean score : -0.076
(partial model without unconserved sides chains):
PDB file :
Tito_3DF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DF0-query.scw
PDB file :
Tito_Scwrl_3DF0.pdb
: