Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYIPYVIENTERGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
2ZL2 Chain:D ((20-192))
------------------DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQ----
General information:
TITO was launched using:
RESULT:
Template:
2ZL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115897 for 1364 contacts (-85.0/contact) +
2D Compatibility (PS) -18943 + (NN) -9088 + (LL) 1296
1D Compatibility (HY) -25200 + (ID) 8650
Total energy: -176482.0 ( -129.39 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2ZL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZL2-query.scw
PDB file :
Tito_Scwrl_2ZL2.pdb
: