Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S03 Chain:B ((16-161))
----------------------------------------------------------------------------------------------------------SVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGS-----------NRMKNNRVEIFFSTDANDLSKIHSILDNEFNP-----
General information:
TITO was launched using:
RESULT:
Template:
3S03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64416 for 925 contacts (-69.6/contact) +
2D Compatibility (PS) -14948 + (NN) -10791 + (LL) 8048
1D Compatibility (HY) -19200 + (ID) 6450
Total energy: -107757.0 ( -116.49 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3S03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S03-query.scw
PDB file :
Tito_Scwrl_3S03.pdb
: