Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFID-LVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
4PT4 Chain:B ((1-90))
MNKAELIDVLTQKLG--SDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQ
General information:
TITO was launched using:
RESULT:
Template:
4PT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8610 for 475 contacts (18.1/contact) +
2D Compatibility (PS) -9685 + (NN) -1260 + (LL) 156
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -8629.0 ( -18.17 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_4PT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PT4-query.scw
PDB file :
Tito_Scwrl_4PT4.pdb
: