Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNHQNMLDNQTILITGGTGSFGKRFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV--DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEI-----SQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGPSQTQFGVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMIDLAKALAPNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHTNNQWLEPDDLLKLL-- |
4TQG Chain:A ((1-319)) | -----SQINDKTIMIFGGSGSLGNRLIETYINNN---IIVNYSRDESKHWSMELKYKSDKLKNIIGDIRDFEKVQQSIMRINPDIIIIAAALKHIDRCEYEINECLDTNIKGLQNVLKVTEINRSNLSNLKAVCFVSTDKACSPVNSYGMSKAICETLVVEKSKY--IKDIKYVCVRYGNVLN-------------------FTLTHTSMTRFIMTLDDSVKLIEYAIINGNSGEIVIPKLNSMYIKDMIELFADKYPIVITGLRSGERMYESLINDTQSMKTVPKGDYYHILPTYDPTIVTE--------------EFYEYSSKQNI--LSKQELENYLNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142994 for 2350 contacts (-60.8/contact) +
2D Compatibility (PS) -31117 + (NN) -14094 + (LL) 2820
1D Compatibility (HY) -24800 + (ID) 5050
Total energy: -215235.0 ( -91.59 by residue)
QMean score : 0.455
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