Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPLSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
2X3Y Chain:E ((49-212))
---------------------ERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFG--
General information:
TITO was launched using:
RESULT:
Template:
2X3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100926 for 1376 contacts (-73.3/contact) +
2D Compatibility (PS) -18184 + (NN) -12967 + (LL) 2372
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -149405.0 ( -108.58 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2X3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X3Y-query.scw
PDB file :
Tito_Scwrl_2X3Y.pdb
: