Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQA----------RLSFENCSKPLDCSLFATTCTPQNPI-GSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW--
1UT1 Chain:A ((9-148))
GSFTPSGTTGTTKLTVTEKCQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCDARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPTDNSAWTTDNGVFYKNDVGSWGGIIGIYVDGQQTN------TPPGNYTLTLTG----------GYWAK
General information:
TITO was launched using:
RESULT:
Template:
1UT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76328 for 807 contacts (-94.6/contact) +
2D Compatibility (PS) -12534 + (NN) -223 + (LL) 1072
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -90563.0 ( -112.22 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_1UT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UT1-query.scw
PDB file :
Tito_Scwrl_1UT1.pdb
: