Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQKTLLIITDGIGYRKDSDHNAFFHAKKPTYDLMFKTLPYSLIDTHGLSVGLPKGQMGNSEVGHMCIGAGRVLYQDLVRISLSLQNDELKNNPAFLNTIQKSHVVHLMGLMSDGGVHSHIEHFIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQMQNICNENIQIATISGRFYAMDRDNRFERIELAYNSLMGLNHTPLSPSEYIQSQYDKNITDEFIIPACFKNYCGMQDDESFIFINFRNDRAREIVSALGQKEFNSFKRQAFKKLHIATMTPYDNS-FPYPVLFP-KESVQNTLAEVVSQHNLTQSHIAETEKYAHVTFFINGGVE-TPFKNENRVLIQSPKVTTYDLKPEMSAKGVTLAVLEQMRL----G-TDLIIVNFANGDMVG-------HT--GNFEASIKAVEAVDACLGEILSLAKE----LDYAMLLTSDHGNCERMKDENQNPLTNHTAGSVYCFVLGNGVKSI--K-NGALNNIASSVLKLMGIKAPATMDEPLF |
| 3LXQ Chain:A ((107-367)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPLTPNLDEL---MQ--EGWQFTQMYAT----GTR--SV-----------R-GIEAVTTGFPPSPSRAVVKLSKSQTGFFTIADLLKEQGYHTQFIYGGE-----ANFDNMKTFFFGNGFDQIVEEKNYTNPGFVGSWGVSDEDLYNKADEEFERLSKGDKPFFSLVFTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARVF-----GANLVPVKHFHIPALIIGKDIQPRKDDRIANNIDMPPTLLSLIGVDAKTPMIGRDL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73544 for 1852 contacts (-39.7/contact) +
2D Compatibility (PS) -25083 + (NN) -11761 + (LL) 16288
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -96300.0 ( -52.00 by residue)
QMean score : 0.336
|
|
|