Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIELDINASDKSLSHRAVIFSLLAQKPCFVRNFLMGEDCLSSLEIAQNLGAKVENTAKNSFKITPP---TTIKEPNKILNCNNSGTSMRLYSGLLSAQKGLFVLSGDNSLNARPMKRIIEPLKAFGAKILGREDNHFAPLAIVGGP-LKACDYESPIASAQVKSAFILSALQAQGISAYKESELSRNHTEIMLKSLGANIQNQDGVLKISPLEKPLESFDFTIANDPSSAFFLALACAITPKSRLLLKNVLLNPTRIEAFEVLKKMGAHIEYV-IQSKDLEVIGDIYIEHAPLKAISIDQNIASL-IDEIPALSIAMLFAKGKSMVRNAKDLRAKESDRIKAVVSNFKALGIECEEFEDGFYIEGLGDASQLKQHFSKIKPPIIKSFNDHRIAMSFAVL-TLAL-PLEIDNLECANISFPTF-----QLWLNLFKKRSLNGN |
4EGR Chain:B ((22-439)) | --------GDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKI--DSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQ--KQSICVSGGGK-LKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEK--EPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQG-----------GTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGRG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -260963 for 3680 contacts (-70.9/contact) +
2D Compatibility (PS) -42293 + (NN) -8721 + (LL) 1336
1D Compatibility (HY) -30800 + (ID) 8550
Total energy: -349991.0 ( -95.11 by residue)
QMean score : 0.513
|
|
|