Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-EC-----VEVLRCE----DFES----LSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGD---F--VQ-MTN---N-HWT-FSIET-TRQCLN---L--KKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVL----PGEGGHVSFAPFD---DL---------EILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGL-E---------KV----AKLSK-----------AELTPQIISER-----ALNGD-----YPICRLTLDTFCSMLGTLAADVALTLGARGGVYL--CGGIIPRFIDYFKTSPFRARFETKGRMGA-FLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 3O8M Chain:A ((78-473)) | ----ETGDFLALDLGGTNLRVVLVKLG-GNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD--------------PQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETT-VVERKLIRKLAELVGTRAARLTVCGVSAICDKRGYK-TAHIAADGSVFNRY-PGYKE-KAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKRLAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120174 for 2349 contacts (-51.2/contact) +
2D Compatibility (PS) -32576 + (NN) -6850 + (LL) 1088
1D Compatibility (HY) 2000 + (ID) 2300
Total energy: -158812.0 ( -67.61 by residue)
QMean score : 0.337
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