Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKA--VDNDIPRGYNNLG-VMYKEGKGVPKDEKKAVEYFRIATEKGYTN--AYINLGIMYMEGRGVPSNYAKATECFRKAMH--KGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR |
| 1NA0 Chain:B ((24-119)) | --------------------------------------------------------------------------------DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-----DYDEAIEYYQKALELDPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28796 for 619 contacts (-46.5/contact) +
2D Compatibility (PS) -10038 + (NN) -6842 + (LL) 9332
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -42994.0 ( -69.46 by residue)
QMean score : 0.440
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