Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDFLEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDEQKNEQEEQRRLREQQRLKQNQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFY-H--K--ASVSVLIMITKDGEF-DYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGGNMISIKVNFTTKEEQ |
| 2GRX Chain:C ((148-224)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWR--YEPGKPGS-GIVVNILFKING-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -40163 for 410 contacts (-98.0/contact) +
2D Compatibility (PS) -7933 + (NN) -5291 + (LL) 14836
1D Compatibility (HY) -800 + (ID) 700
Total energy: -40051.0 ( -97.69 by residue)
QMean score : 0.393
|
|
|