Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ-----NASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
3TNU Chain:B ((398-455))
----------------AEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQE-------
General information:
TITO was launched using:
RESULT:
Template:
3TNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9866 for 193 contacts (51.1/contact) +
2D Compatibility (PS) -5888 + (NN) -4267 + (LL) 1908
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -1331.0 ( -6.90 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_3TNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TNU-query.scw
PDB file :
Tito_Scwrl_3TNU.pdb
: