Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLVILSGAGISAESGIKTFRDAGGLWEGHDIMEVASPYGWKKNPQKVLDFYNQRRRQLFEVYPNKAHKALAELEKHYQVN-IITQNVDDLHERAGSSRILHLHGELLSVRSEKDPNLVYRWE---KDLNLGDLAQDKA----QLRPDIVWFGEEVP--LLKEAVSLVKQVHLLIIIGTSLQVYPAASL-YTHANKDALIYYIDPKAKNARLPQNVQCINENAVHAMQDLMPKLIEMASQEMLK
1S7G Chain:C ((16-244))
-KHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLF-AEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDC-LDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAG-----EVLPKIVEEVKRLRSE
General information:
TITO was launched using:
RESULT:
Template:
1S7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82509 for 1754 contacts (-47.0/contact) +
2D Compatibility (PS) -23256 + (NN) -10671 + (LL) 1124
1D Compatibility (HY) -16800 + (ID) 4450
Total energy: -136562.0 ( -77.86 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1S7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7G-query.scw
PDB file :
Tito_Scwrl_1S7G.pdb
: