Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQ-GIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKES-ALSAGAREVFLIEEPMAAAIGAGLPV---KEPQGSLIVDIGGGTTEIGVISLGGLVIS--KSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVS-GR-----DQVSGLLHTIELSSDDV---FEAIKDQ------VREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKL---------PVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 3DWL Chain:A ((3-399)) | --------SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATR------TEDLDFFIGNDALKK---ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRC-EPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLR--------LKTAERIKEECCYVCPDIVKEFSRFDR--LKYAS---------IDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYK-NIVLSGGSTLFKNFGNRLQRDLKRIVDERGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160699 for 2406 contacts (-66.8/contact) +
2D Compatibility (PS) -31645 + (NN) -5984 + (LL) 2056
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -205372.0 ( -85.36 by residue)
QMean score : 0.418
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