Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRATAIKIFSFSSA--------LALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQ------KWIDLPRNMLK-------------TMFMQEAQKACLGVALPPYGAGAPTYAVRFTILS--------------FSLLEKENSTYRAEFALGYDISVKGDSHSGVIIKHENISSLENKTTKTSKNGSQDFQESAIQSLQHVSTQAMQEAISLIKKAVEAQSVSPLKK-------------------------------------------------- |
| 1SVB Chain:? ((1-302)) | SRCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAE----GKPSMDVWLDAIYQEN-PAKTREYCL----HAKLSDTKVAARCPTMGPATLAEEHQGGTVCKRDQSDRGWGNHCGLFGKGSIVACVKAACEAKKKATGHVYDA---NKIVYTVKVEPHTGDYVAANETHSGRKTASFTISSEKTILTMGEYGDVSLLCRVASGV--DLAQTVILELDKTVEHLPTAWQVHRDWFNDLALPWKHEGAQNWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHIEGTKYHLKSGHVTCEVGLEKLKMKGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32143 for 1320 contacts (-24.4/contact) +
2D Compatibility (PS) -21487 + (NN) 7059 + (LL) 1448
1D Compatibility (HY) 2000 + (ID) 1950
Total energy: -45073.0 ( -34.15 by residue)
QMean score : 0.204
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