Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQ-TIKLPVSKIAYIG-SYVEVPAMLNVWDRVVGVSDYA--FKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGN----PKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEID--ASKKFAKMQETLDFIAERLKGVKKKKGVEL--FHKA--NK-ISGHQAISSDILEKGGIDNFGLKYV-------KFGRADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPT-MDIGGPRAP-LISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 3R5T Chain:A ((3-297)) | -----------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDA--PVIASAATTQSTFFEQWR-KL--AELRQVKKLWP--AGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQA-IAPTILVDYS-DQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDL-P-KGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQQAQAFLHDPILKNLPSIQRKQVYGLGENSFRIDLFSAREIINSLLRRFAGEQAQSLVMPL----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120757 for 2194 contacts (-55.0/contact) +
2D Compatibility (PS) -28763 + (NN) -9859 + (LL) 5632
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -157947.0 ( -71.99 by residue)
QMean score : 0.479
|
|
|