Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLG-SFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGN--PKAVEHAKKFGISFLSFQ--EKTIVEVMEDIDAQAKALEV--DASKKLAKMQETLDFIKERLKNVKKKKGVELF-H-K--ANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISP-LSPEDVLNNPKFSTIKAIKNKQVYKLPTM--DIGGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 2R7A Chain:A ((2-256)) | ------------------------------------------------AERIVVAGGSLTELIYAMGAGERVVGVDETTSYPP-------ETAKLPHIGY--WKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQNVAAKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATH---QQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRSIAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85045 for 1933 contacts (-44.0/contact) +
2D Compatibility (PS) -26600 + (NN) -18217 + (LL) 7948
1D Compatibility (HY) -10000 + (ID) 2100
Total energy: -134014.0 ( -69.33 by residue)
QMean score : 0.539
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