Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTFFDKARELTEELEK-TQAESIHQAAKLVADSIMNDGIIQAFGSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLISNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSVQGDAALELEGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYEYNFAIEDKFADRIFHL
1JEO Chain:A ((11-178))
-----SNNILILKKFYTNDEWKNKLDSLIDRIIK----AKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVG----------ET-----TTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCEC-G-----------NVVEFADLTIPLEVKKSK--YL------PMGTTFEETALIFLDLVIAEIM---KRLNLDESEII-KRHCN-------------------
General information:
TITO was launched using:
RESULT:
Template:
1JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75751 for 1311 contacts (-57.8/contact) +
2D Compatibility (PS) -18116 + (NN) -6603 + (LL) 4116
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -102504.0 ( -78.19 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JEO-query.scw
PDB file :
Tito_Scwrl_1JEO.pdb
: