Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILKEVCIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYGVAKHVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVF----GCITDSG-LLDKPAINELLKAAA--GLEVTFHMA-FDELVETEKLSAIDWLVEQGVTRILTHGGDGAKLPEETFVQWRKYIDYAAGRIIILPGGGIK-SHNLEWIIKETGAAEIHGTDLFGER
1MZH Chain:A ((27-205))
--------------LKSEELGIYAVCVN-----------PYHVKLASSIA--KKVKVCCVI-----GFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNE---EEIKKAVEICIEAGADFIKTSTGFA--PRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIE-AGADRIGTSS-----
General information:
TITO was launched using:
RESULT:
Template:
1MZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121790 for 1344 contacts (-90.6/contact) +
2D Compatibility (PS) -18011 + (NN) -5706 + (LL) 2768
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -146789.0 ( -109.22 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1MZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZH-query.scw
PDB file :
Tito_Scwrl_1MZH.pdb
: