Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPTMMTYINEEEEMCRAILANFQ---------TNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVALRNYESKYTPFTYTVKFGTA-----GNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
| 2ZJ3 Chain:A ((15-369)) | FSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQ-RCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCK-ERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISM-QERRKEIMLGLKRLPDLIKEVLSM-DDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHS-VDCLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152398 for 3137 contacts (-48.6/contact) +
2D Compatibility (PS) -36100 + (NN) -11129 + (LL) 704
1D Compatibility (HY) -15600 + (ID) 3150
Total energy: -217673.0 ( -69.39 by residue)
QMean score : 0.425
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