Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLPGAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK
4HNJ Chain:C ((2-23))
--------------------------------------------------------------------------EQWAREIGAQLRRMADDLNAQY-
General information:
TITO was launched using:
RESULT:
Template:
4HNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3317 for 80 contacts (41.5/contact) +
2D Compatibility (PS) -2351 + (NN) -105 + (LL) 3144
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 2655.0 ( 33.19 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_4HNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HNJ-query.scw
PDB file :
Tito_Scwrl_4HNJ.pdb
: