Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDR---EDILLVKSGAIFEEVN-GKKKGIARCFFSKSLIFPTRDPIVLKAFETSEICFINAERAFGKLEEDQIL-SNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSN-SKTPIFPIWLQINVLAKLANCSISTISSTVNELHAEGILDIK-SSPWKLKGKEKKIEILENENQKMKLNERKHKSNVF
1FT9 Chain:A ((22-213))
------------------------GFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCM-HSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQT--GVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRLKAAA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1FT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79552 for 1259 contacts (-63.2/contact) +
2D Compatibility (PS) -19749 + (NN) -2622 + (LL) 3312
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -105061.0 ( -83.45 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1FT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FT9-query.scw
PDB file :
Tito_Scwrl_1FT9.pdb
: