Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MEKMIQTIILYSVFAVGFLYLLHFTLRKLENILTSFFYEVSQDQSLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQKEVLFLEEIDQLIAQNKSYEQQLQAWENEQPKQIIEVPTFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIREFDALVRTEKIRCALPYKVILHLFEMYS--PEQLHLFAQSFQRYSERSSKLPVKQIYQSSYLSPEQKLKVMQEEGTLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVY---------NIHFYRGLICIHVASKG-SANHFEKLWQPAHRSYKIEYQVQKELIG-----GVIIQYGSKSIDMSYQELIKRSTEKMEAEVKL- |
| 3EYW Chain:B ((5-411)) | MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHL------QIIARARDVDHYIRLRQAGVEK--PERETFEGALKTGRLALESLGLG--PYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLY---PDFNIDIAAEQEALSRADLIVWQHPMQ------WYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3587 for 2251 contacts (1.6/contact) +
2D Compatibility (PS) -34324 + (NN) -1570 + (LL) 2120
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -35187.0 ( -15.63 by residue)
QMean score : 0.247
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