Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTT--YNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
3CUO Chain:A ((10-97))
-------SAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVY----
General information:
TITO was launched using:
RESULT:
Template:
3CUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51821 for 560 contacts (-92.5/contact) +
2D Compatibility (PS) -9016 + (NN) -3422 + (LL) 908
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -67601.0 ( -120.72 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_3CUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CUO-query.scw
PDB file :
Tito_Scwrl_3CUO.pdb
: