Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVA-GQQGLTVNRSK-DSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKY----FESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAM--TYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE----------------------------- |
| 5A9H Chain:A ((1-194)) | -----------------MAASQEIFLQVLNLADGDVKVTVLGSRNNSLLVESVSSFQNTTHYSKLHLEAKSQDLH-FHLKYNSLSVHNDHSVEEKNCYQLLIHQDGESISSMLVKDTGIKPANGMAAIRFINTLHKDLNISLDTDAPLSVGKDYGVSAYRTVLRGKYPAVHCETEDKVFSLDLGQLDFGTTYLFVITNLQAWKAEDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25748 for 930 contacts (-27.7/contact) +
2D Compatibility (PS) -15061 + (NN) 7467 + (LL) 1148
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -34344.0 ( -36.93 by residue)
QMean score : 0.213
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