Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKFDLENGYVVKADGEMLVGGKFVVFKDSMKNWEPPYENKKLSESEVQEIIQQVKQSTNENTVQISFE
3QF7 Chain:C ((7-41))
-------------------LDYFELFKEYLKKRE---ENHEKLLKILDELLDEVKKS-----------
General information:
TITO was launched using:
RESULT:
Template:
3QF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12331 for 158 contacts (78.0/contact) +
2D Compatibility (PS) -3852 + (NN) -1550 + (LL) 2040
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 6419.0 ( 40.63 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_3QF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QF7-query.scw
PDB file :
Tito_Scwrl_3QF7.pdb
: