Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGKFQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF |
4XPM Chain:A ((1-39)) | ----SPDSAKISKEQLKKLHSNILNEIFSQSQVNKPGPLTVPF------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4793 for 139 contacts (34.5/contact) +
2D Compatibility (PS) -4063 + (NN) -154 + (LL) 5816
1D Compatibility (HY) -400 + (ID) 400
Total energy: 5592.0 ( 40.23 by residue)
QMean score : 0.369
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