Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDAIILKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAALMEEIKRRFGDTL
1MVF Chain:D ((4-47))
----SSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPV----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13364 for 185 contacts (-72.2/contact) +
2D Compatibility (PS) -4833 + (NN) -680 + (LL) 3148
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -19829.0 ( -107.18 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1MVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MVF-query.scw
PDB file :
Tito_Scwrl_1MVF.pdb
: