Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLFDTHVHLNDEAFD----------DDIEEVIKRAQENDVTRMAVVGFNKETIDRALELAEKYD-F----ISLIVGWHPTDAITFT-DEDLEWLRDLALT--HPKVVALGEMGLDYHWDT-SPKETQFEVFRKQIRLAKEV-NLPIVIHNREATEDVVRILQEEHAE-EVG-GIMHCFGETVEVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPN----RG--------------------KRNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKRLFRIKD |
| 3IPW Chain:A ((27-323)) | QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLC-EKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSDLCQLNKEL--GYNGCKGVVHCFDGTEEEMNQILNEGWDIGVTGNSLQS--IELLNVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNMYFPT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136009 for 2148 contacts (-63.3/contact) +
2D Compatibility (PS) -27224 + (NN) -11968 + (LL) 352
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -194049.0 ( -90.34 by residue)
QMean score : 0.554
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