Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITINDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQNGAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKKNEQVKFETVYKEDDSLNKGVEKVVQEGKNGKKVVEYKVTFENGKEKKRDVIKENVTSNKTDKVVVRGTKEKVVATPVSNVSTSSATSSSSSSASSTPSGGKTYKMESTAYSGGGTTAYGINLSANPGLKVIAVDPRIIPLGSKVWVEG-----YGEAIAGDTGGAIKGN-IVDVYFPNESQCYSW-GR--RMVTVKVLN |
3CZB Chain:A ((251-339)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAGAAGVALPP---GRAIAVDPGYHAYGGFYWLDAAFPVYRRAVTALDTGGAIKGEVRADLYMGSGAVAGVEAGRVRHTLRLYRL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42448 for 452 contacts (-93.9/contact) +
2D Compatibility (PS) -8157 + (NN) -3934 + (LL) 20004
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: -36935.0 ( -81.71 by residue)
QMean score : 0.357
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