Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYK-GAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSK-----NLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
3IWZ Chain:A ((23-228))
----DAGTIERFLA-HSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDT-REVILRTRTQ-CELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQG--TQLRVSRQELARLVGCSR-EMAGRVLKKLQADGLLHARGKTVVLYG---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105336 for 1429 contacts (-73.7/contact) +
2D Compatibility (PS) -21677 + (NN) -7271 + (LL) 2716
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -137368.0 ( -96.13 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_3IWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWZ-query.scw
PDB file :
Tito_Scwrl_3IWZ.pdb
: