Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILVIDVGNTNCTVGVYEKQKLLKHWRMTTDRHRTSDELGMTVLNFFSYANLTP------SDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTG-LNLKVDNPREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDESGVYQGGAIAPGIMISTEALYNRAAKLPRVDIAESSQIIGKSTVSSMQAGIFYGFVGQCEGIIAEMKKQSNASPVVVATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK
3BF1 Chain:B ((4-242))MYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQTEDEL---------FSHLHPLLGDAMREIKGIGVASVVPTQNTVIERFSQKYFHISPIWVKA--KNGCVKWNVKNPSEVGADRVANVVAFVKEYGKNGIIIDMGTATTVDLV-VNGSYEGGAILPGFFMMVHSLFRGTAKLPLVEVKPADFVVGKDTEENIRLGVVNGSVYALEGIIGRIKEVYGDLPVVL-TGGQSKIVKDMIKH-EIFDEDLTIKGV-------------


General information:
TITO was launched using:
RESULT:

Template: 3BF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168575 for 1827 contacts (-92.3/contact) +
2D Compatibility (PS) -24948 + (NN) -9078 + (LL) 1768
1D Compatibility (HY) -21600 + (ID) 4500
Total energy: -226933.0 ( -124.21 by residue)
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3BF1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BF1-query.scw
PDB file : Tito_Scwrl_3BF1.pdb: