Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLE-RCGTGR--VVLVHDGARPFITLDIIDRLLIGVEQSKAAICAV-KVKDTVKRV-MNGVVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLG--TDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
2XWN Chain:B ((14-229))
--------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG------HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
General information:
TITO was launched using:
RESULT:
Template:
2XWN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117257 for 1589 contacts (-73.8/contact) +
2D Compatibility (PS) -22622 + (NN) -7096 + (LL) 1612
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -163413.0 ( -102.84 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2XWN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWN-query.scw
PDB file :
Tito_Scwrl_2XWN.pdb
: