Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MDKAKQIYLEFKREADFLELDFPLFLGDG----PGFGELCMDYSEQDGYMLYGYE----HGKRNSEFKTTDFDEFKYEVFL----HICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPA-------WIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL------------------------ |
| 3A9L Chain:A ((4-210)) | TDTYPNIEALENAETVGVAYNIEVKRQNPSMIYFSPHAGGIEVGTTELIYRVVELTGGSLYLFQGLLPSGNSRLHVTSTHFDEPMAVCMLSKHTDAVSFHGYKDD-YNKNTLVGGLNTELRNLIVSKLNSKGIAAEVATDRFTATDPDNIVNRCASGKGVQLEISSAQRRAFFQNNDWSKANRGNVTQEFLDYAEAIKEAEAEYYGLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22599 for 1125 contacts (-20.1/contact) +
2D Compatibility (PS) -15844 + (NN) 2488 + (LL) 176
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -38129.0 ( -33.89 by residue)
QMean score : 0.141
|
|
|