Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVLEAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITDLRKQLRDAGIEFKVYKNSLTRRAVEA-------NGYEGLEGALTGPNAIAFSNEDVVAPAKILND------------------------------FAKDHEALEIKAGVIEGKVASLEEIKALAT----LPSREGLLSMLC-------NVLQAPVRGLAIATKAVADQKEGQEA--- |
3JSY Chain:A ((9-221)) | ---MAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42683 for 1064 contacts (-40.1/contact) +
2D Compatibility (PS) -17290 + (NN) -3072 + (LL) 388
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -73907.0 ( -69.46 by residue)
QMean score : 0.480
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