Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQ--SAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSL-RE-------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQK--SAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFE-KRIGKM-AEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
| 1SVV Chain:A ((24-354)) | --------------------VGMHPKILDLMARD-NMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALR-PW-EAVIATQLGHISTHETG-AIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISN-TT-EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEAC-GIRLA-WPSASNQLFPILENT--M----IAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKRL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196145 for 2703 contacts (-72.6/contact) +
2D Compatibility (PS) -34661 + (NN) -14343 + (LL) 1172
1D Compatibility (HY) -4400 + (ID) 3200
Total energy: -251577.0 ( -93.07 by residue)
QMean score : 0.506
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