Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKKSENQTEKTETKENKGMTRREMLKLSAVAGTGIAVGATGLGTILNVVDQVDKALTPKEKAETGVPFYASNQAGIITAQQTYCYIASFDIQTESRQILQDLFVKWTKFADLTTSGGVLRDVDNDMLPPNDTGEAD-GLGISNFTVTLGYGPTFFEKDGKDRFGVKAKKPKYLEKIPHMAHDSLDEAYSDGDLCIQVCADDQQVAFHGIRNFIRLASGVAVVRWIEEGFLSAPK-----NETPRNLFGFKDGTANVDHDSNKGYKDVVWAEKD--EPEWMRNGSYLGYRKIQMLIEIWDRSSLLDQEDTFGRKKASGAPYHKKHEHDKVDPSK------LPADSHVRLAKDT-----KQQMHRRAYSYTNGIDKSTGTIDAGLLFICFTQNPAKQFLPMLSIMGKMDKLNEYTVPIGSAMFACQGGLA-PGEIFGEKLL |
| 3O72 Chain:A ((13-386)) | -------------------------------------------------------------VARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDER----FGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKGIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNS-GQLDMGLLFVCYQHDLEKGFLTVQKRLN-GEALEEYVKPIGGGYFFALPGVKDANDYLGSALL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108993 for 2942 contacts (-37.0/contact) +
2D Compatibility (PS) -36887 + (NN) -10075 + (LL) 3868
1D Compatibility (HY) -25200 + (ID) 6950
Total energy: -184237.0 ( -62.62 by residue)
QMean score : ?
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