Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWNTPMFTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYS-------HTKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
2OD0 Chain:A ((5-103))
------------------ILKDSMKLFEA-LGTIKSRSMFGGFGLFADETMFALVV--NNQLHIRADQQTSSDFETQ-GLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENA---------
General information:
TITO was launched using:
RESULT:
Template:
2OD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29953 for 666 contacts (-45.0/contact) +
2D Compatibility (PS) -9710 + (NN) -58 + (LL) 3064
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -40307.0 ( -60.52 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_2OD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OD0-query.scw
PDB file :
Tito_Scwrl_2OD0.pdb
: