Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW
1XQA Chain:A ((2-113))
MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG----N-AFAVMRDNDGFILTLMKGKE-VQ---YP--KTFHVGFPQESEEQVDKINQRLKEDGFLV-EPPKH-A--AYTFYVEAPGGFTIEVMC
General information:
TITO was launched using:
RESULT:
Template:
1XQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54124 for 770 contacts (-70.3/contact) +
2D Compatibility (PS) -12243 + (NN) -5903 + (LL) 636
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -79434.0 ( -103.16 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_1XQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQA-query.scw
PDB file :
Tito_Scwrl_1XQA.pdb
: